Difference between revisions of "Chromatograms"
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− | + | < [[Sample documents]] | |
− | < | + | The \Chromato macro is an example application for the positioning environment. I've written it for my brother, who is writing a thesis in [[Chemistry]]. |
+ | |||
+ | <texcode> | ||
+ | \newdimen\Width \newdimen\Height | ||
+ | \define[3]\Chromato{% | ||
+ | \setbox\scratchbox\hbox{\externalfigure[#1][width=0.6\makeupwidth]}% | ||
+ | \setuppositioning[unit=pt] \Width=\wd\scratchbox \Height=\ht\scratchbox | ||
+ | \placefigure[][fig:#1]{#2}{\startpositioning | ||
+ | \position(0,0){\externalfigure[#1][width=0.6\makeupwidth]}#3% | ||
+ | \stoppositioning}} | ||
+ | \define[3]\LRposition{\edef\YPos{\withoutpt{\the\dimexpr(\withoutpt{% | ||
+ | \the\dimexpr(#1pt/100)}\Height - 0.1\baselineskip)}}% | ||
+ | \position(#2,\YPos){\vbox to 2pt{\vss{\hbox to 0pt{#3}\vss}}}} | ||
+ | \define[4]\Lbrace{\LRposition{#1}0{\hss\rotate[rotation=90]{% | ||
+ | $\overbrace{\hskip#2\Height}^{\rotate[rotation=270]{#4}}$}\hskip#3em}} | ||
+ | \define[4]\Rbrace{\LRposition{#1}{\withoutpt{\the\Width}}{\hskip#3em | ||
+ | \rotate[rotation=270]{$\overbrace{\hskip#2\Height}^{% | ||
+ | \rotate[rotation=90]{#4}}$}\hss}} | ||
+ | \define[2]\Lpfeil{\LRposition{#1}0{\hss{\tx#2} $\rightarrow$}} | ||
+ | \define[2]\Rpfeil{\LRposition{#1}{\withoutpt{\the\Width}}{$\leftarrow$ \tx#2}} | ||
+ | \define[3]\Oposition{\edef\XPos{\withoutpt{\the\dimexpr(\withoutpt{% | ||
+ | \the\dimexpr(#1pt/100)}\Width)}}% | ||
+ | \position(\XPos,-\withoutpt{\the\dimexpr(#2\baselineskip)}){% | ||
+ | \hbox to 0pt{\hss#3\hss}}} | ||
+ | \define[2]\Oben{\Oposition{#1}{0.8}{\tx#2}} | ||
+ | \define[3]\Obrace{\Oposition{#1}{2.5}{$\overbrace{\hskip#2\Width}^{\hbox{#3}}$}} | ||
+ | |||
+ | \starttext | ||
+ | \Chromato{ecolizeit}{Expression der rekombinanten Fucosyltransferase~V in | ||
+ | {\it E.~coli}.}{% | ||
+ | \Oben5{BRS} \Oben{15}1 \Oben{26}2 \Oben{38}3 \Oben{50}4 | ||
+ | \Oben{61}5 \Oben{72}6 \Oben{83}7 \Oben{94}8 | ||
+ | \Obrace{49}{0.68}{\tx1--7} | ||
+ | \Lpfeil{12}{97\,kDa} \Lpfeil{20}{66\,kDA} | ||
+ | \Lpfeil{32}{45\,kDa} \Lpfeil{52}{31\,kDa} | ||
+ | \Lbrace{40}{0.8}{4}A \Lbrace{90}{0.2}{0.1}B | ||
+ | \Rpfeil{29}{FucT~V} \Rpfeil{87}{FucT~V} | ||
+ | \Rpfeil{40}1 \Rpfeil{80}2 \Rbrace{60}{0.4}3{\txx1--2}} | ||
+ | \stoptext | ||
+ | </texcode> | ||
+ | |||
+ | (A [[media:chromatograms.tex|downloadable version]] of the macro is also available.) | ||
+ | |||
+ | The resulting figure looks like this, though you'll have to imagine the graphic. The output with the graphic included can be downloaded [[media:Chromato.pdf|here, in pdf form]]. | ||
+ | |||
+ | <context> | ||
\newdimen\Width \newdimen\Height | \newdimen\Width \newdimen\Height | ||
\define[3]\Chromato{% | \define[3]\Chromato{% | ||
Line 38: | Line 83: | ||
\Rpfeil{40}1 \Rpfeil{80}2 \Rbrace{60}{0.4}3{\txx1--2}} | \Rpfeil{40}1 \Rpfeil{80}2 \Rbrace{60}{0.4}3{\txx1--2}} | ||
\stoptext | \stoptext | ||
− | </ | + | </context> |
+ | |||
+ | You can download the chromato module from http://pmrb.free.fr/work/OS/ConTeXt/ | ||
+ | |||
+ | [[Category:Graphics]] | ||
+ | [[Category:Sample documents]] | ||
+ | [[Category:Sciences]] |
Latest revision as of 17:21, 8 June 2020
The \Chromato macro is an example application for the positioning environment. I've written it for my brother, who is writing a thesis in Chemistry.
\newdimen\Width \newdimen\Height \define[3]\Chromato{% \setbox\scratchbox\hbox{\externalfigure[#1][width=0.6\makeupwidth]}% \setuppositioning[unit=pt] \Width=\wd\scratchbox \Height=\ht\scratchbox \placefigure[][fig:#1]{#2}{\startpositioning \position(0,0){\externalfigure[#1][width=0.6\makeupwidth]}#3% \stoppositioning}} \define[3]\LRposition{\edef\YPos{\withoutpt{\the\dimexpr(\withoutpt{% \the\dimexpr(#1pt/100)}\Height - 0.1\baselineskip)}}% \position(#2,\YPos){\vbox to 2pt{\vss{\hbox to 0pt{#3}\vss}}}} \define[4]\Lbrace{\LRposition{#1}0{\hss\rotate[rotation=90]{% $\overbrace{\hskip#2\Height}^{\rotate[rotation=270]{#4}}$}\hskip#3em}} \define[4]\Rbrace{\LRposition{#1}{\withoutpt{\the\Width}}{\hskip#3em \rotate[rotation=270]{$\overbrace{\hskip#2\Height}^{% \rotate[rotation=90]{#4}}$}\hss}} \define[2]\Lpfeil{\LRposition{#1}0{\hss{\tx#2} $\rightarrow$}} \define[2]\Rpfeil{\LRposition{#1}{\withoutpt{\the\Width}}{$\leftarrow$ \tx#2}} \define[3]\Oposition{\edef\XPos{\withoutpt{\the\dimexpr(\withoutpt{% \the\dimexpr(#1pt/100)}\Width)}}% \position(\XPos,-\withoutpt{\the\dimexpr(#2\baselineskip)}){% \hbox to 0pt{\hss#3\hss}}} \define[2]\Oben{\Oposition{#1}{0.8}{\tx#2}} \define[3]\Obrace{\Oposition{#1}{2.5}{$\overbrace{\hskip#2\Width}^{\hbox{#3}}$}} \starttext \Chromato{ecolizeit}{Expression der rekombinanten Fucosyltransferase~V in {\it E.~coli}.}{% \Oben5{BRS} \Oben{15}1 \Oben{26}2 \Oben{38}3 \Oben{50}4 \Oben{61}5 \Oben{72}6 \Oben{83}7 \Oben{94}8 \Obrace{49}{0.68}{\tx1--7} \Lpfeil{12}{97\,kDa} \Lpfeil{20}{66\,kDA} \Lpfeil{32}{45\,kDa} \Lpfeil{52}{31\,kDa} \Lbrace{40}{0.8}{4}A \Lbrace{90}{0.2}{0.1}B \Rpfeil{29}{FucT~V} \Rpfeil{87}{FucT~V} \Rpfeil{40}1 \Rpfeil{80}2 \Rbrace{60}{0.4}3{\txx1--2}} \stoptext
(A downloadable version of the macro is also available.)
The resulting figure looks like this, though you'll have to imagine the graphic. The output with the graphic included can be downloaded here, in pdf form.
You can download the chromato module from http://pmrb.free.fr/work/OS/ConTeXt/